An annual index of US industrial production, 1790–1915

JH Davis - The Quarterly Journal of Economics, 2004 - academic.oup.com
As a remedy for the notorious deficiency of pre-Civil War US macroeconomic data, this study
introduces an annual index of American industrial production consistently defined from …

CryoDRGN: reconstruction of heterogeneous cryo-EM structures using neural networks

ED Zhong, T Bepler, B Berger, JH Davis - Nature methods, 2021 - nature.com
Cryo-electron microscopy (cryo-EM) single-particle analysis has proven powerful in
determining the structures of rigid macromolecules. However, many imaged protein complexes …

An improved annual chronology of US business cycles since the 1790s

JH Davis - The Journal of Economic History, 2006 - cambridge.org
The NBER's pre–World War I dating of business cycles implies that the US economy spent
nearly every other year in recession. This article extends earlier efforts at redating for the 1796…

Addressing preferred specimen orientation in single-particle cryo-EM through tilting

YZ Tan, PR Baldwin, JH Davis, JR Williamson… - Nature …, 2017 - nature.com
We present a strategy for tackling preferred specimen orientation in single-particle cryogenic
electron microscopy by employing tilts during data collection. We also describe a tool to …

Complications of cardiac resuscitation

JP Krischer, EG Fine, JH Davis, EL Nagel - Chest, 1987 - Elsevier
In a prospective study of the complications of cardiac resuscitation, 705 cases were
autopsied to identify the cause of death and the pathologic findings attributable to cardiac …

[HTML][HTML] Measuring the activity of BioBrick promoters using an in vivo reference standard

JR Kelly, AJ Rubin, JH Davis, CM Ajo-Franklin… - Journal of biological …, 2009 - Springer
Background The engineering of many-component, synthetic biological systems is being made
easier by the development of collections of reusable, standard biological parts. However, …

Design, construction and characterization of a set of insulated bacterial promoters

JH Davis, AJ Rubin, RT Sauer - Nucleic acids research, 2011 - academic.oup.com
We have generated a series of variable-strength, constitutive, bacterial promoters that act
predictably in different sequence contexts, span two orders of magnitude in strength and …

[PDF][PDF] Modular assembly of the bacterial large ribosomal subunit

JH Davis, YZ Tan, B Carragher, CS Potter, D Lyumkis… - Cell, 2016 - cell.com
The ribosome is a complex macromolecular machine and serves as an ideal system for
understanding biological macromolecular assembly. Direct observation of ribosome assembly in …

Learning structural heterogeneity from cryo-electron sub-tomograms with tomoDRGN

BM Powell, JH Davis - Nature Methods, 2024 - nature.com
Cryo-electron tomography (cryo-ET) enables observation of macromolecular complexes in
their native, spatially contextualized cellular environment. Cryo-ET processing software to …

Uncovering structural ensembles from single-particle cryo-EM data using cryoDRGN

…, BM Powell, ED Zhong, B Berger, JH Davis - Nature protocols, 2023 - nature.com
Single-particle cryogenic electron microscopy (cryo-EM) has emerged as a powerful technique
to visualize the structural landscape sampled by a protein complex. However, algorithmic …